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SRX20822243: UMB0509
1 OXFORD_NANOPORE (MinION) run: 273,011 spots, 516.1M bases, 436.7Mb downloads

Design: DNA Library Preparation
Submitted by: Loyola University Chicago
Study: Female Urinary Microbiota Genome Sequencing
show Abstracthide Abstract
Recently, bacterial communities (microbiota) have been discovered in the female bladder. Thus, the “sterile urine” paradigm is no longer valid. In an effort to provide a comprehensive view of the newly discovered female urinary microbiota (FUM), we have established an Enhanced Quantitative Urine Culture (EQUC) protocol. EQUC isolates bacteria from 75-90% of urine samples deemed 'no growth' by the standard clinical microbiology urine culture method. We have begun to sequence and annotate the genomes of these isolated bacteria.
Sample:
SAMN08895440 • SRS3150593 • All experiments • All runs
Library:
Name: UMB0509-n
Instrument: MinION
Strategy: WGS
Source: GENOMIC
Selection: PCR
Layout: SINGLE
Runs: 1 run, 273,011 spots, 516.1M bases, 436.7Mb
Run# of Spots# of BasesSizePublished
SRR25068158273,011516.1M436.7Mb2023-06-29

ID:
28253565

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